Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13□□□□□ -0.33
TRGV1A0A0A0MS02 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 AC026471.1-201ENST00000564629 3026 ntBASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 AL136038.4-201ENST00000603606 1261 ntBASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 GNAS-203ENST00000306120 1878 ntBASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 AC067852.2-201ENST00000590513 2313 ntBASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TRGV1A0A0A0MS02 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 AC134043.2-201ENST00000624206 2238 ntBASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 AC117947.1-201ENST00000427448 529 ntBASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 SLC25A6P5-201ENST00000435663 894 ntBASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 AC024563.2-201ENST00000603282 481 ntBASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 LINC00602-201ENST00000629776 2065 ntBASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 PCDHB18P-201ENST00000524813 2368 ntBASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV1A0A0A0MS02 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRGV1A0A0A0MS02 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV1A0A0A0MS02 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV1A0A0A0MS02 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRGV1A0A0A0MS02 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms