Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 ESPNP-201ENST00000270691 2015 ntBASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 AL020989.1-201ENST00000422979 469 ntBASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 MCCD1P2-201ENST00000423228 335 ntBASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 AP006288.1-201ENST00000446065 395 ntBASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC187A0A096LP49 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 CRYGEP-201ENST00000412192 528 ntBASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 AC002310.6-201ENST00000624451 1377 ntBASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 AC120498.9-201ENST00000339021 3867 ntBASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 AL020996.1-203ENST00000536896 2307 ntBASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC187A0A096LP49 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 COX5BP2-201ENST00000392354 334 ntBASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 AC005829.1-201ENST00000570002 483 ntBASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 AC004706.3-202ENST00000621574 984 ntBASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 KRT8P47-201ENST00000604727 1398 ntBASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CCDC187A0A096LP49 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
CCDC187A0A096LP49 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC187A0A096LP49 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms