Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 LINC01023-201ENST00000606054 436 ntBASIC16.95■□□□□ 0.3
GPC6Q9Y625 AC068418.2-201ENST00000577309 3703 ntBASIC16.95■□□□□ 0.3
GPC6Q9Y625 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 AC093010.1-201ENST00000473625 1624 ntBASIC16.95■□□□□ 0.3
GPC6Q9Y625 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.95■□□□□ 0.3
GPC6Q9Y625 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GPC6Q9Y625 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 LINC00896-202ENST00000609602 2128 ntBASIC16.94■□□□□ 0.3
GPC6Q9Y625 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 AC211429.1-201ENST00000415277 523 ntBASIC16.94■□□□□ 0.3
GPC6Q9Y625 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 AC104390.1-201ENST00000555663 520 ntBASIC16.94■□□□□ 0.3
GPC6Q9Y625 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
GPC6Q9Y625 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GPC6Q9Y625 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 SLC25A3P1-201ENST00000443844 931 ntBASIC16.93■□□□□ 0.3
GPC6Q9Y625 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 AC009065.1-201ENST00000564055 1225 ntBASIC16.93■□□□□ 0.3
GPC6Q9Y625 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 MIR3180-4-201ENST00000582223 153 ntBASIC16.93■□□□□ 0.3
GPC6Q9Y625 AC005363.2-201ENST00000618631 242 ntBASIC16.93■□□□□ 0.3
GPC6Q9Y625 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GPC6Q9Y625 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.93■□□□□ 0.3
GPC6Q9Y625 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms