Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 CNN2P11-201ENST00000429351 262 ntBASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 RHOQP3-201ENST00000437982 621 ntBASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 STK25P1-201ENST00000585406 838 ntBASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 MIR4469-201ENST00000583919 79 ntBASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 AC004790.2-201ENST00000623588 572 ntBASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN10AQ9Y5Y9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 KRT19P2-202ENST00000557173 1012 ntBASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 OR7E47P-204ENST00000575924 449 ntBASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN10AQ9Y5Y9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 ADH5P3-201ENST00000433842 1137 ntBASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 RFPL4AP1-201ENST00000530883 850 ntBASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SCN10AQ9Y5Y9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 AP000344.2-201ENST00000512987 629 ntBASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 AL353135.1-201ENST00000606729 504 ntBASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SCN10AQ9Y5Y9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms