Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AC098831.1-202ENST00000438821 336 ntBASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 PGAM5P1-201ENST00000518923 814 ntBASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 AC027601.4-201ENST00000611259 610 ntBASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
SNX11Q9Y5W9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AC112698.1-201ENST00000510299 916 ntBASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AL356488.2-201ENST00000602755 427 ntBASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AC140113.2-201ENST00000604370 208 ntBASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AC025062.2-201ENST00000605477 670 ntBASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX11Q9Y5W9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 FAM220CP-201ENST00000395253 831 ntBASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 MED15P5-201ENST00000423150 992 ntBASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 AC005104.2-201ENST00000427818 678 ntBASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX11Q9Y5W9 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 RNA5SP415-201ENST00000517246 115 ntBASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 AC034105.1-201ENST00000563488 319 ntBASIC17.65■□□□□ 0.42
SNX11Q9Y5W9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms