Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.39■□□□□ 0.38
PCDHGA3Q9Y5H0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 AC064862.7-201ENST00000604520 867 ntBASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA3Q9Y5H0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 AL163051.1-201ENST00000569214 1512 ntBASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 MRPL3P1-201ENST00000400109 1033 ntBASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 MINOS1P3-201ENST00000457048 203 ntBASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA3Q9Y5H0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 AC020763.4-201ENST00000623414 4170 ntBASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA3Q9Y5H0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms