Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 MTDHP5-201ENST00000598980 586 ntBASIC23.24■■□□□ 1.31
SPG7Q9UQ90 AC079781.4-201ENST00000641908 219 ntBASIC23.24■■□□□ 1.31
SPG7Q9UQ90 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 AC132938.5-201ENST00000624980 1813 ntBASIC23.24■■□□□ 1.31
SPG7Q9UQ90 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
SPG7Q9UQ90 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 AC004967.1-201ENST00000453589 447 ntBASIC23.23■■□□□ 1.31
SPG7Q9UQ90 CYB561-217ENST00000582997 877 ntTSL 5 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SPG7Q9UQ90 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 GGCT-205ENST00000409436 954 ntTSL 3 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 RPS8P6-201ENST00000426177 609 ntBASIC23.22■■□□□ 1.31
SPG7Q9UQ90 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SPG7Q9UQ90 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.21■■□□□ 1.31
SPG7Q9UQ90 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 TCAP-202ENST00000578283 583 ntTSL 5 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 AC134684.3-201ENST00000641758 218 ntBASIC23.21■■□□□ 1.31
SPG7Q9UQ90 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SPG7Q9UQ90 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 AC006504.4-201ENST00000592118 1568 ntBASIC23.2■■□□□ 1.3
SPG7Q9UQ90 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SPG7Q9UQ90 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms