Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDZRN3Q9UPQ7 REXO1L9P-201ENST00000604264 2108 ntBASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 CYP51A1P1-201ENST00000492267 1507 ntBASIC23.03■■□□□ 1.28
PDZRN3Q9UPQ7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 KRT8P50-201ENST00000562022 1438 ntBASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 AC106730.1-201ENST00000566722 1090 ntBASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 AL591684.3-201ENST00000605187 298 ntBASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDZRN3Q9UPQ7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
PDZRN3Q9UPQ7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 MIR5100-201ENST00000579544 119 ntBASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDZRN3Q9UPQ7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDZRN3Q9UPQ7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms