Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 AC012317.2-201ENST00000623305 2251 ntBASIC19.09■□□□□ 0.65
SIX4Q9UIU6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.09■□□□□ 0.65
SIX4Q9UIU6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SIX4Q9UIU6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 FAM220CP-201ENST00000395253 831 ntBASIC19.08■□□□□ 0.64
SIX4Q9UIU6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SIX4Q9UIU6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 AC122714.2-201ENST00000502787 707 ntBASIC19.07■□□□□ 0.64
SIX4Q9UIU6 AC111152.3-201ENST00000569699 673 ntBASIC19.07■□□□□ 0.64
SIX4Q9UIU6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SIX4Q9UIU6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 AC132008.2-207ENST00000454517 770 ntBASIC19.06■□□□□ 0.64
SIX4Q9UIU6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SIX4Q9UIU6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms