Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 AC092865.7-201ENST00000641832 219 ntBASIC17.64■□□□□ 0.41
MKS1Q9NXB0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MKS1Q9NXB0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 AC106886.4-201ENST00000623557 2502 ntBASIC17.63■□□□□ 0.41
MKS1Q9NXB0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 TSPY14P-201ENST00000303979 915 ntBASIC17.63■□□□□ 0.41
MKS1Q9NXB0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 AC024243.1-201ENST00000609234 778 ntBASIC17.63■□□□□ 0.41
MKS1Q9NXB0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 KRT89P-201ENST00000620027 1478 ntBASIC17.63■□□□□ 0.41
MKS1Q9NXB0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MKS1Q9NXB0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 PRORSD1P-201ENST00000295112 541 ntBASIC17.62■□□□□ 0.41
MKS1Q9NXB0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 C2orf69P3-201ENST00000565542 1120 ntBASIC17.62■□□□□ 0.41
MKS1Q9NXB0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 NEK4P2-201ENST00000580004 1012 ntBASIC17.62■□□□□ 0.41
MKS1Q9NXB0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 LYSMD4-203ENST00000378904 2122 ntBASIC17.62■□□□□ 0.41
MKS1Q9NXB0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
MKS1Q9NXB0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKS1Q9NXB0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms