Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 MIR3687-2-201ENST00000577708 61 ntBASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 MIR3687-1-201ENST00000614492 61 ntBASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HCFC1R1Q9NWW0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 ELK2BP-201ENST00000415014 1224 ntBASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AC004832.2-201ENST00000426397 482 ntBASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AP001160.2-201ENST00000596071 487 ntBASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 AC006504.4-201ENST00000592118 1568 ntBASIC18.47■□□□□ 0.55
HCFC1R1Q9NWW0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 AL353593.2-201ENST00000602529 1483 ntBASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 AC100803.2-201ENST00000562459 1963 ntBASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 AL020989.1-201ENST00000422979 469 ntBASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 DNAJB3-201ENST00000446806 729 ntBASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 AC002347.1-201ENST00000569543 541 ntBASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
HCFC1R1Q9NWW0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HCFC1R1Q9NWW0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HCFC1R1Q9NWW0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.46■□□□□ 0.54
HCFC1R1Q9NWW0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 AP000974.1-201ENST00000623909 2387 ntBASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 AL589182.2-201ENST00000619332 1049 ntBASIC18.45■□□□□ 0.54
HCFC1R1Q9NWW0 AC004706.3-202ENST00000621574 984 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms