Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L13-201ENST00000554103 1267 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L4-201ENST00000566884 1269 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L15-201ENST00000611059 1267 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L23-201ENST00000615195 1269 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L24-201ENST00000617576 1269 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L22-201ENST00000618238 1269 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L20-201ENST00000619712 1269 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L21-201ENST00000622058 1269 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L10-201ENST00000622460 1267 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DUX4L25-201ENST00000624915 1269 ntBASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
CDC42SE1Q9NRR8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 MIR193BHG-211ENST00000641433 5365 ntBASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CDC42SE1Q9NRR8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms