Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AC005104.2-201ENST00000427818 678 ntBASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 FAM87A-204ENST00000613235 858 ntBASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 AC116353.5-201ENST00000638148 1699 ntBASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC52A3Q9NQ40 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 AL355075.4-201ENST00000554988 638 ntBASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 MIR4785-201ENST00000585005 73 ntBASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 AC010947.1-201ENST00000623454 693 ntBASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 AC092865.7-201ENST00000641832 219 ntBASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 AC105020.1-201ENST00000435356 2205 ntBASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC52A3Q9NQ40 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 KRT89P-201ENST00000620027 1478 ntBASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC52A3Q9NQ40 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC52A3Q9NQ40 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms