Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.81■□□□□ 0.6
CD248Q9HCU0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.81■□□□□ 0.6
CD248Q9HCU0 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CD248Q9HCU0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.81■□□□□ 0.6
CD248Q9HCU0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD248Q9HCU0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 IRX1P1-201ENST00000438849 1838 ntBASIC18.8■□□□□ 0.6
CD248Q9HCU0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 TSPY22P-201ENST00000427496 604 ntBASIC18.8■□□□□ 0.6
CD248Q9HCU0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CD248Q9HCU0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD248Q9HCU0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.79■□□□□ 0.6
CD248Q9HCU0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 TPSP2-201ENST00000561760 610 ntBASIC18.79■□□□□ 0.6
CD248Q9HCU0 RN7SL510P-201ENST00000581311 263 ntBASIC18.79■□□□□ 0.6
CD248Q9HCU0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
CD248Q9HCU0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD248Q9HCU0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD248Q9HCU0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CD248Q9HCU0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms