Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 AC138761.1-201ENST00000584393 385 ntBASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 AC025580.3-201ENST00000617932 1424 ntBASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZFYVE28Q9HCC9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 KLF4P1-201ENST00000412782 1185 ntBASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 GGTLC5P-201ENST00000617623 998 ntBASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 AC091812.2-201ENST00000619081 385 ntBASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ZFYVE28Q9HCC9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 AC003669.1-201ENST00000334569 611 ntBASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 AC023141.13-201ENST00000604991 943 ntBASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZFYVE28Q9HCC9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 AL049757.1-201ENST00000616842 1596 ntBASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 AC004461.1-201ENST00000412461 403 ntBASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 MIR4745-201ENST00000577608 62 ntBASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 AC105339.1-204ENST00000636249 355 ntBASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.29■□□□□ 0.84
ZFYVE28Q9HCC9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms