Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC010980.2-201ENST00000587099 1412 ntBASIC17.05■□□□□ 0.32
VCX3BQ9H321 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VCX3BQ9H321 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.05■□□□□ 0.32
VCX3BQ9H321 PCDHB17P-201ENST00000539533 2393 ntBASIC17.04■□□□□ 0.32
VCX3BQ9H321 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 KRT18P11-201ENST00000435214 1283 ntBASIC17.04■□□□□ 0.32
VCX3BQ9H321 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 AL031432.3-201ENST00000607698 485 ntBASIC17.04■□□□□ 0.32
VCX3BQ9H321 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
VCX3BQ9H321 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VCX3BQ9H321 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.03■□□□□ 0.32
VCX3BQ9H321 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VCX3BQ9H321 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VCX3BQ9H321 AC093010.1-201ENST00000473625 1624 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms