Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 AC140113.3-201ENST00000605663 199 ntBASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 AL355312.1-201ENST00000407115 2176 ntBASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 AC022898.2-201ENST00000616822 1312 ntBASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.46■□□□□ 0.55
FOXP3Q9BZS1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
FOXP3Q9BZS1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
FOXP3Q9BZS1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 AL512604.3-201ENST00000569583 964 ntBASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FOXP3Q9BZS1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AC099343.3-201ENST00000605834 2503 ntBASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AL441883.1-201ENST00000566170 1045 ntBASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AD000864.1-201ENST00000624076 2295 ntBASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 AP001094.4-201ENST00000579008 2176 ntBASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.44■□□□□ 0.54
FOXP3Q9BZS1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 AC008687.5-201ENST00000593746 558 ntBASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.43■□□□□ 0.54
FOXP3Q9BZS1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms