Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AL139384.1-201ENST00000612143 3047 ntBASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AC060834.1-201ENST00000443027 2032 ntBASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AL353719.1-201ENST00000566847 864 ntBASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 REXO1L10P-201ENST00000615707 1290 ntBASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AL359736.2-201ENST00000621992 437 ntBASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 REXO1L12P-201ENST00000622156 912 ntBASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 LINC01451-201ENST00000623792 534 ntBASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
KRTAP3-1Q9BYR8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 HTR7P1-202ENST00000624664 4411 ntBASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 ID1-201ENST00000376105 1233 ntBASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC9.06□□□□□ -0.96
KRTAP3-1Q9BYR8 EIF2S2P5-201ENST00000457635 968 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms