Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 AC099343.3-201ENST00000605834 2503 ntBASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 AC103564.2-201ENST00000432853 1299 ntBASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 AC140658.5-201ENST00000438532 169 ntBASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 MIR4453-201ENST00000584019 89 ntBASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 AC008735.3-201ENST00000596646 500 ntBASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 U62317.3-201ENST00000608319 855 ntBASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL25A1Q9BXS0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL25A1Q9BXS0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL25A1Q9BXS0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 CLDN5-201ENST00000403084 2357 ntBASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 AC010460.3-201ENST00000511359 1579 ntBASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 ACTL9-202ENST00000612068 1252 ntBASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL25A1Q9BXS0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 GUSBP5-202ENST00000510805 1989 ntBASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 RN7SL837P-201ENST00000463010 287 ntBASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 AL583810.1-201ENST00000553344 1045 ntBASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 WASH4P-201ENST00000564273 1246 ntBASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 AC106872.11-201ENST00000605838 421 ntBASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 AL138828.2-201ENST00000615812 383 ntBASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL25A1Q9BXS0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.87■□□□□ 0.45
COL25A1Q9BXS0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms