Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SSBP3Q9BWW4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 PHGDH-209ENST00000641074 1780 ntBASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 AC004870.1-201ENST00000315132 882 ntBASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 KRT18P31-201ENST00000506277 1292 ntBASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 AC096582.2-201ENST00000510860 516 ntBASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 IFNL4P1-201ENST00000607083 540 ntBASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 AL732292.2-201ENST00000609649 430 ntBASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.91□□□□□ -0.02
SSBP3Q9BWW4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 POM121L3P-201ENST00000419331 1163 ntBASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 KRT16P4-201ENST00000453883 522 ntBASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 AL121894.2-201ENST00000602977 491 ntBASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 PCDHB18P-201ENST00000524813 2368 ntBASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SSBP3Q9BWW4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms