Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 Z69720.1-201ENST00000601483 472 ntBASIC18.5■□□□□ 0.55
HAPLN3Q96S86 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HAPLN3Q96S86 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 AC096633.1-201ENST00000422446 749 ntBASIC18.49■□□□□ 0.55
HAPLN3Q96S86 LINC00265-3P-201ENST00000447588 903 ntBASIC18.49■□□□□ 0.55
HAPLN3Q96S86 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HAPLN3Q96S86 AC099398.1-201ENST00000567919 2776 ntBASIC18.48■□□□□ 0.55
HAPLN3Q96S86 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AC091607.1-201ENST00000490318 1060 ntBASIC18.48■□□□□ 0.55
HAPLN3Q96S86 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AP005901.3-202ENST00000581653 237 ntBASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AC005336.2-201ENST00000593183 939 ntBASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AC008764.6-201ENST00000595909 2069 ntBASIC18.48■□□□□ 0.55
HAPLN3Q96S86 AC125634.1-201ENST00000438758 1403 ntBASIC18.48■□□□□ 0.55
HAPLN3Q96S86 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.48■□□□□ 0.55
HAPLN3Q96S86 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
HAPLN3Q96S86 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms