Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RAB40CQ96S21 AL353807.1-201ENST00000427475 662 ntBASIC14.52□□□□□ -0.09
RAB40CQ96S21 AC128676.1-201ENST00000454392 318 ntBASIC14.52□□□□□ -0.09
RAB40CQ96S21 AC008040.2-201ENST00000461049 708 ntBASIC14.52□□□□□ -0.09
RAB40CQ96S21 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB40CQ96S21 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB40CQ96S21 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RAB40CQ96S21 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB40CQ96S21 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAB40CQ96S21 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB40CQ96S21 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB40CQ96S21 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 LINC00304-203ENST00000565008 1864 ntBASIC14.51□□□□□ -0.09
RAB40CQ96S21 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 TSPY20P-201ENST00000450910 630 ntBASIC14.51□□□□□ -0.09
RAB40CQ96S21 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 AC133681.1-201ENST00000465482 601 ntBASIC14.51□□□□□ -0.09
RAB40CQ96S21 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 RN7SL471P-201ENST00000580476 299 ntBASIC14.51□□□□□ -0.09
RAB40CQ96S21 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 AC110285.5-201ENST00000611501 352 ntBASIC14.51□□□□□ -0.09
RAB40CQ96S21 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB40CQ96S21 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB40CQ96S21 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB40CQ96S21 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB40CQ96S21 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms