Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.32■□□□□ 0.2
SNX18Q96RF0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 AC005521.1-201ENST00000393351 872 ntBASIC16.31■□□□□ 0.2
SNX18Q96RF0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 KRT18P57-201ENST00000443599 1254 ntBASIC16.31■□□□□ 0.2
SNX18Q96RF0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 EGLN1P1-201ENST00000531623 762 ntBASIC16.31■□□□□ 0.2
SNX18Q96RF0 AC010947.1-201ENST00000623454 693 ntBASIC16.31■□□□□ 0.2
SNX18Q96RF0 AC112497.1-201ENST00000624824 639 ntBASIC16.31■□□□□ 0.2
SNX18Q96RF0 AC092865.7-201ENST00000641832 219 ntBASIC16.31■□□□□ 0.2
SNX18Q96RF0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SNX18Q96RF0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SNX18Q96RF0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 AC113347.1-201ENST00000413321 391 ntBASIC16.3■□□□□ 0.2
SNX18Q96RF0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX18Q96RF0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SNX18Q96RF0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 AC103702.1-201ENST00000548801 2630 ntBASIC16.29■□□□□ 0.2
SNX18Q96RF0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX18Q96RF0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX18Q96RF0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms