Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 KRT8P47-201ENST00000604727 1398 ntBASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 AL390719.2-201ENST00000606993 987 ntBASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.7■□□□□ 0.26
MS4A4EQ96PG1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 AL645929.1-201ENST00000420084 975 ntBASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 SPDYE13P-201ENST00000445314 798 ntBASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 AC005332.3-201ENST00000589904 676 ntBASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MS4A4EQ96PG1 AC009949.1-201ENST00000623048 1830 ntBASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 Z83836.1-201ENST00000624605 1642 ntBASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 DDX43P3-201ENST00000441064 443 ntBASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 AC112698.1-201ENST00000510299 916 ntBASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
MS4A4EQ96PG1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MS4A4EQ96PG1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms