Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 KRT18P38-201ENST00000449496 1282 ntBASIC16.92■□□□□ 0.3
COL21A1Q96P44 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 AC093010.1-201ENST00000473625 1624 ntBASIC16.92■□□□□ 0.3
COL21A1Q96P44 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL21A1Q96P44 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
COL21A1Q96P44 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 PVRIG2P-201ENST00000435460 978 ntBASIC16.91■□□□□ 0.3
COL21A1Q96P44 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 AL590326.2-201ENST00000625139 305 ntBASIC16.91■□□□□ 0.3
COL21A1Q96P44 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL21A1Q96P44 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
COL21A1Q96P44 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.9■□□□□ 0.3
COL21A1Q96P44 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL21A1Q96P44 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COL21A1Q96P44 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
COL21A1Q96P44 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.89■□□□□ 0.29
COL21A1Q96P44 AC112907.2-201ENST00000448639 330 ntBASIC16.89■□□□□ 0.29
COL21A1Q96P44 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
COL21A1Q96P44 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms