Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 AL121894.2-201ENST00000602977 491 ntBASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 REXO1L6P-202ENST00000619970 1078 ntBASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMARCD1Q96GM5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 AC009949.1-201ENST00000623048 1830 ntBASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 DDX43P3-201ENST00000441064 443 ntBASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 SAPCD2P3-201ENST00000455031 850 ntBASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 EMBP1-201ENST00000458200 901 ntBASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.77■□□□□ 0.6
SMARCD1Q96GM5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SMARCD1Q96GM5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SMARCD1Q96GM5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMARCD1Q96GM5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMARCD1Q96GM5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 AKR1C7P-201ENST00000305623 895 ntBASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 AC122714.2-201ENST00000502787 707 ntBASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMARCD1Q96GM5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 COX5BP2-201ENST00000392354 334 ntBASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 AC132008.2-207ENST00000454517 770 ntBASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SMARCD1Q96GM5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms