Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 KRT17P6-201ENST00000453795 1220 ntBASIC16.04■□□□□ 0.16
CPNE4Q96A23 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 AC074051.2-201ENST00000565115 352 ntBASIC16.04■□□□□ 0.16
CPNE4Q96A23 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 AC135050.7-201ENST00000624508 2218 ntBASIC16.04■□□□□ 0.16
CPNE4Q96A23 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE4Q96A23 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CPNE4Q96A23 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE4Q96A23 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE4Q96A23 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE4Q96A23 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE4Q96A23 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CPNE4Q96A23 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE4Q96A23 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE4Q96A23 AL845331.1-201ENST00000424978 1190 ntBASIC16.03■□□□□ 0.16
CPNE4Q96A23 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE4Q96A23 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms