Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 ECEL1P2-202ENST00000465689 757 ntBASIC16.08■□□□□ 0.16
PTP4A1Q93096 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 AC145285.6-201ENST00000604632 637 ntBASIC16.08■□□□□ 0.16
PTP4A1Q93096 AC022898.2-201ENST00000616822 1312 ntBASIC16.08■□□□□ 0.16
PTP4A1Q93096 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 LINC00167-201ENST00000530583 1419 ntBASIC16.08■□□□□ 0.16
PTP4A1Q93096 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTP4A1Q93096 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.08■□□□□ 0.16
PTP4A1Q93096 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 HMGA1P5-201ENST00000412453 271 ntBASIC16.07■□□□□ 0.16
PTP4A1Q93096 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 AC133561.5-201ENST00000635547 218 ntBASIC16.07■□□□□ 0.16
PTP4A1Q93096 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 LINC00304-203ENST00000565008 1864 ntBASIC16.07■□□□□ 0.16
PTP4A1Q93096 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.07■□□□□ 0.16
PTP4A1Q93096 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTP4A1Q93096 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PTP4A1Q93096 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTP4A1Q93096 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms