Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATP2A3Q93084 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
ATP2A3Q93084 NSUN5P1-202ENST00000421140 1535 ntBASIC18.84■□□□□ 0.61
ATP2A3Q93084 NSUN5P2-203ENST00000457352 1529 ntBASIC18.84■□□□□ 0.61
ATP2A3Q93084 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 AL160237.2-201ENST00000556165 472 ntBASIC18.84■□□□□ 0.61
ATP2A3Q93084 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 AL353801.3-201ENST00000609898 542 ntBASIC18.84■□□□□ 0.61
ATP2A3Q93084 AC004263.2-201ENST00000617183 678 ntBASIC18.84■□□□□ 0.61
ATP2A3Q93084 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
ATP2A3Q93084 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP2A3Q93084 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A3Q93084 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP2A3Q93084 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A3Q93084 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ATP2A3Q93084 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A3Q93084 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP2A3Q93084 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ATP2A3Q93084 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP2A3Q93084 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.83■□□□□ 0.61
ATP2A3Q93084 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP2A3Q93084 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 MINOS1P3-201ENST00000457048 203 ntBASIC18.83■□□□□ 0.6
ATP2A3Q93084 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AC104692.2-201ENST00000603054 253 ntBASIC18.83■□□□□ 0.6
ATP2A3Q93084 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.83■□□□□ 0.6
ATP2A3Q93084 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AC005332.8-201ENST00000622750 2735 ntBASIC18.83■□□□□ 0.6
ATP2A3Q93084 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 AC009102.3-201ENST00000623118 1491 ntBASIC18.83■□□□□ 0.6
ATP2A3Q93084 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP2A3Q93084 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ATP2A3Q93084 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP2A3Q93084 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 AC079781.3-201ENST00000449110 356 ntBASIC18.82■□□□□ 0.6
ATP2A3Q93084 KRT16P4-201ENST00000453883 522 ntBASIC18.82■□□□□ 0.6
ATP2A3Q93084 AC009078.2-202ENST00000463353 338 ntBASIC18.82■□□□□ 0.6
ATP2A3Q93084 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP2A3Q93084 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms