Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SDHAP2-201ENST00000455183 2001 ntBASIC15.77■□□□□ 0.12
AP3S1Q92572 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.77■□□□□ 0.12
AP3S1Q92572 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3S1Q92572 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.77■□□□□ 0.12
AP3S1Q92572 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
AP3S1Q92572 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 MIR149-201ENST00000384879 89 ntBASIC15.77■□□□□ 0.12
AP3S1Q92572 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.77■□□□□ 0.12
AP3S1Q92572 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.77■□□□□ 0.12
AP3S1Q92572 HLA-B-256ENST00000639848 1089 ntBASIC15.77■□□□□ 0.12
AP3S1Q92572 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S1Q92572 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.77■□□□□ 0.11
AP3S1Q92572 LINC00304-203ENST00000565008 1864 ntBASIC15.77■□□□□ 0.11
AP3S1Q92572 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.77■□□□□ 0.11
AP3S1Q92572 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.11
AP3S1Q92572 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.77■□□□□ 0.11
AP3S1Q92572 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.77■□□□□ 0.11
AP3S1Q92572 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.77■□□□□ 0.11
AP3S1Q92572 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.77■□□□□ 0.11
AP3S1Q92572 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S1Q92572 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3S1Q92572 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
AP3S1Q92572 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.76■□□□□ 0.11
AP3S1Q92572 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3S1Q92572 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.76■□□□□ 0.11
AP3S1Q92572 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.76■□□□□ 0.11
AP3S1Q92572 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.76■□□□□ 0.11
AP3S1Q92572 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.76■□□□□ 0.11
AP3S1Q92572 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3S1Q92572 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
AP3S1Q92572 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 FLJ38576-201ENST00000623820 2459 ntBASIC15.76■□□□□ 0.11
AP3S1Q92572 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 AL603756.1-201ENST00000606511 2163 ntBASIC15.76■□□□□ 0.11
AP3S1Q92572 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S1Q92572 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S1Q92572 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP3S1Q92572 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP3S1Q92572 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S1Q92572 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3S1Q92572 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.75■□□□□ 0.11
AP3S1Q92572 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.75■□□□□ 0.11
AP3S1Q92572 AF201337.1-201ENST00000520239 748 ntBASIC15.75■□□□□ 0.11
AP3S1Q92572 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S1Q92572 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S1Q92572 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3S1Q92572 AC105036.2-201ENST00000569468 176 ntBASIC15.75■□□□□ 0.11
AP3S1Q92572 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S1Q92572 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S1Q92572 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3S1Q92572 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.75■□□□□ 0.11
AP3S1Q92572 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms