Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.66■□□□□ 0.1
RPS4Y2Q8TD47 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 OR6D1P-202ENST00000641007 5290 ntBASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 CCR12P-201ENST00000446203 998 ntBASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 AC113404.2-201ENST00000507884 177 ntBASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RPS4Y2Q8TD47 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.1
RPS4Y2Q8TD47 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RPS4Y2Q8TD47 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.64■□□□□ 0.1
RPS4Y2Q8TD47 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 AP003071.4-201ENST00000562276 1284 ntBASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 AC010653.2-201ENST00000623505 997 ntBASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RPS4Y2Q8TD47 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RPS4Y2Q8TD47 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms