Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM11BQ8TCY0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 AC068418.2-201ENST00000577309 3703 ntBASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 HYMAI-201ENST00000635591 3347 ntBASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
SMIM11BQ8TCY0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 BX276092.2-201ENST00000417668 665 ntBASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 OR2A1-AS1-201ENST00000462305 773 ntBASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 C1QL1P1-201ENST00000568105 661 ntBASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SMIM11BQ8TCY0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms