Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 AC006538.3-201ENST00000612495 578 ntBASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 AC068880.1-201ENST00000507289 2297 ntBASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHKBP1Q8TBC3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 AP005117.1-201ENST00000584346 1413 ntBASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PMS2P1-201ENST00000431037 1228 ntBASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 ABCD1P5-201ENST00000445663 754 ntBASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 SCARNA2-201ENST00000458748 420 ntBASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 AC093909.1-201ENST00000504731 1122 ntBASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 GPALPP1-207ENST00000611650 899 ntBASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHKBP1Q8TBC3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 SART3-203ENST00000546611 1184 ntBASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHKBP1Q8TBC3 AC132938.6-201ENST00000623828 1655 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms