Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
COL22A1Q8NFW1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 AC107890.1-201ENST00000422478 521 ntBASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 AC140658.5-201ENST00000438532 169 ntBASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC23.64■■□□□ 1.38
COL22A1Q8NFW1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 AL157384.1-201ENST00000445995 2473 ntBASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.64■■□□□ 1.37
COL22A1Q8NFW1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 AL513480.1-201ENST00000451731 511 ntBASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 RN7SL589P-201ENST00000481268 310 ntBASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 AC125807.1-201ENST00000483097 614 ntBASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 SPDYE22P-201ENST00000582158 798 ntBASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 AL158211.3-201ENST00000607385 239 ntBASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL22A1Q8NFW1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 FAM58DP-201ENST00000428076 619 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 SLC25A39P2-201ENST00000537614 270 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 BAD-207ENST00000544785 525 ntTSL 3 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AL390754.1-201ENST00000619088 582 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AL590787.1-201ENST00000568856 1315 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 ESPNP-201ENST00000270691 2015 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 COX5BP8-201ENST00000416911 349 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 LINC00982-205ENST00000420957 435 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 TREML5P-201ENST00000421694 576 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AL135744.1-201ENST00000565098 629 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 TUBB3P1-201ENST00000405796 1332 ntBASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.62■■□□□ 1.37
COL22A1Q8NFW1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL22A1Q8NFW1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL22A1Q8NFW1 AC005082.1-201ENST00000413042 2259 ntBASIC23.61■■□□□ 1.37
COL22A1Q8NFW1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL22A1Q8NFW1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL22A1Q8NFW1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms