Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC093503.3-201ENST00000624917 2352 ntBASIC21.92■■□□□ 1.1
RTL9Q8NET4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTL9Q8NET4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTL9Q8NET4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RTL9Q8NET4 AC135776.1-201ENST00000319817 2481 ntBASIC21.92■■□□□ 1.1
RTL9Q8NET4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 MED15P5-201ENST00000423150 992 ntBASIC21.91■■□□□ 1.1
RTL9Q8NET4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.91■■□□□ 1.1
RTL9Q8NET4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 FAM197Y3-203ENST00000618346 717 ntBASIC21.91■■□□□ 1.1
RTL9Q8NET4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.91■■□□□ 1.1
RTL9Q8NET4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTL9Q8NET4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 AC100803.2-201ENST00000562459 1963 ntBASIC21.9■■□□□ 1.1
RTL9Q8NET4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.9■■□□□ 1.1
RTL9Q8NET4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 AC006557.2-201ENST00000592985 1240 ntBASIC21.9■■□□□ 1.1
RTL9Q8NET4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 AL691403.2-201ENST00000618460 490 ntBASIC21.9■■□□□ 1.1
RTL9Q8NET4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTL9Q8NET4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.9■■□□□ 1.1
RTL9Q8NET4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.89■■□□□ 1.1
RTL9Q8NET4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.89■■□□□ 1.1
RTL9Q8NET4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTL9Q8NET4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTL9Q8NET4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTL9Q8NET4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTL9Q8NET4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTL9Q8NET4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
RTL9Q8NET4 AL591424.1-201ENST00000442569 1213 ntBASIC21.89■■□□□ 1.1
RTL9Q8NET4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.89■■□□□ 1.1
RTL9Q8NET4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RTL9Q8NET4 AL589182.2-201ENST00000619332 1049 ntBASIC21.89■■□□□ 1.1
RTL9Q8NET4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.89■■□□□ 1.1
RTL9Q8NET4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
RTL9Q8NET4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTL9Q8NET4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.89■■□□□ 1.09
RTL9Q8NET4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTL9Q8NET4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTL9Q8NET4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.89■■□□□ 1.09
RTL9Q8NET4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RTL9Q8NET4 SIRPAP1-201ENST00000448467 1770 ntBASIC21.89■■□□□ 1.09
RTL9Q8NET4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.89■■□□□ 1.09
RTL9Q8NET4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTL9Q8NET4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTL9Q8NET4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTL9Q8NET4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.88■■□□□ 1.09
RTL9Q8NET4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTL9Q8NET4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.88■■□□□ 1.09
RTL9Q8NET4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTL9Q8NET4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTL9Q8NET4 AL020989.1-201ENST00000422979 469 ntBASIC21.88■■□□□ 1.09
RTL9Q8NET4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
RTL9Q8NET4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.88■■□□□ 1.09
RTL9Q8NET4 UNC93B6-202ENST00000528242 690 ntBASIC21.88■■□□□ 1.09
RTL9Q8NET4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms