Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 CKBP1-201ENST00000565489 1086 ntBASIC17.4■□□□□ 0.38
HIPK4Q8NE63 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 AC011298.2-201ENST00000617989 482 ntBASIC17.4■□□□□ 0.38
HIPK4Q8NE63 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HIPK4Q8NE63 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HIPK4Q8NE63 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
HIPK4Q8NE63 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIPK4Q8NE63 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIPK4Q8NE63 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
HIPK4Q8NE63 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 AL031985.4-201ENST00000642138 673 ntBASIC17.39■□□□□ 0.37
HIPK4Q8NE63 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 AL355312.1-201ENST00000407115 2176 ntBASIC17.39■□□□□ 0.37
HIPK4Q8NE63 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.39■□□□□ 0.37
HIPK4Q8NE63 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 AC006058.3-201ENST00000606217 1069 ntBASIC17.38■□□□□ 0.37
HIPK4Q8NE63 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms