Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 MIR564-202ENST00000385049 94 ntBASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC197Q8NCU1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC197Q8NCU1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 HYMAI-201ENST00000635591 3347 ntBASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 AC068418.2-201ENST00000577309 3703 ntBASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC197Q8NCU1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC197Q8NCU1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms