Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 AC096582.2-201ENST00000510860 516 ntBASIC18.25■□□□□ 0.51
KDM1BQ8NB78 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 AC011467.2-201ENST00000598425 242 ntBASIC18.25■□□□□ 0.51
KDM1BQ8NB78 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 TP73-AS1-210ENST00000637775 1455 ntBASIC18.25■□□□□ 0.51
KDM1BQ8NB78 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KDM1BQ8NB78 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 AC097374.2-201ENST00000618617 1306 ntBASIC18.24■□□□□ 0.51
KDM1BQ8NB78 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 AL031008.1-201ENST00000619963 541 ntBASIC18.24■□□□□ 0.51
KDM1BQ8NB78 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KDM1BQ8NB78 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 AC093010.1-201ENST00000473625 1624 ntBASIC18.23■□□□□ 0.51
KDM1BQ8NB78 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 AKR1C7P-201ENST00000305623 895 ntBASIC18.23■□□□□ 0.51
KDM1BQ8NB78 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 AC106795.1-205ENST00000512851 1056 ntBASIC18.23■□□□□ 0.51
KDM1BQ8NB78 DUTP2-201ENST00000519164 463 ntBASIC18.23■□□□□ 0.51
KDM1BQ8NB78 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.23■□□□□ 0.51
KDM1BQ8NB78 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 AC132938.6-201ENST00000623828 1655 ntBASIC18.22■□□□□ 0.51
KDM1BQ8NB78 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 RCN1P2-201ENST00000398357 915 ntBASIC18.22■□□□□ 0.51
KDM1BQ8NB78 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.22■□□□□ 0.51
KDM1BQ8NB78 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms