Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AP005901.3-202ENST00000581653 237 ntBASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH20Q8N6Y1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 NSUN5P1-202ENST00000421140 1535 ntBASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 NSUN5P2-203ENST00000457352 1529 ntBASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 AC093677.2-201ENST00000600169 1863 ntBASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 AL450487.1-201ENST00000426799 995 ntBASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 AC091607.1-201ENST00000490318 1060 ntBASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PCDH20Q8N6Y1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH20Q8N6Y1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms