Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 SLC25A6P5-201ENST00000435663 894 ntBASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 AL591684.3-201ENST00000605187 298 ntBASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 NOC2LP1-202ENST00000452600 2235 ntBASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ARHGEF39Q8N4T4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 FAM220CP-201ENST00000395253 831 ntBASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.84■□□□□ 0.29
ARHGEF39Q8N4T4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ARHGEF39Q8N4T4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ARHGEF39Q8N4T4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
ARHGEF39Q8N4T4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 AC132008.2-207ENST00000454517 770 ntBASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 EMBP1-201ENST00000458200 901 ntBASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ARHGEF39Q8N4T4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms