Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
VPS8Q8N3P4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
VPS8Q8N3P4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 HIST2H3DP1-201ENST00000401004 416 ntBASIC27.81■■■□□ 2.04
VPS8Q8N3P4 FAM197Y8-203ENST00000450145 560 ntBASIC27.81■■■□□ 2.04
VPS8Q8N3P4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 AL662844.1-201ENST00000546340 181 ntBASIC27.81■■■□□ 2.04
VPS8Q8N3P4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
VPS8Q8N3P4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 MED22-202ENST00000371999 987 ntTSL 3 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 HNRNPDP1-201ENST00000439535 754 ntBASIC27.8■■■□□ 2.04
VPS8Q8N3P4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 AC109462.3-201ENST00000573934 613 ntBASIC27.8■■■□□ 2.04
VPS8Q8N3P4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
VPS8Q8N3P4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 AC003669.1-201ENST00000334569 611 ntBASIC27.79■■■□□ 2.04
VPS8Q8N3P4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 NKAPP1-205ENST00000585790 367 ntBASIC27.79■■■□□ 2.04
VPS8Q8N3P4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
VPS8Q8N3P4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VPS8Q8N3P4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC27.78■■■□□ 2.04
VPS8Q8N3P4 SCARNA2-201ENST00000458748 420 ntBASIC27.78■■■□□ 2.04
VPS8Q8N3P4 AC073648.2-201ENST00000510116 352 ntBASIC27.78■■■□□ 2.04
VPS8Q8N3P4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
VPS8Q8N3P4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
VPS8Q8N3P4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VPS8Q8N3P4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
VPS8Q8N3P4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
VPS8Q8N3P4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 AL049840.3-201ENST00000602669 611 ntBASIC27.77■■■□□ 2.04
VPS8Q8N3P4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS8Q8N3P4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms