Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 COX5BP2-201ENST00000392354 334 ntBASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 POLE2-203ENST00000553805 496 ntTSL 2 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 MYLKP1-201ENST00000509077 1580 ntBASIC24.56■■□□□ 1.52
LTBP4Q8N2S1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 HAUS4P1-201ENST00000406739 1145 ntBASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 BCYRN1-201ENST00000418539 200 ntBASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 AC132938.2-201ENST00000579188 680 ntBASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 MIR4259-201ENST00000584466 101 ntBASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 RETN-203ENST00000629642 400 ntTSL 5 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 AL591163.1-201ENST00000641757 987 ntBASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 AC141586.3-201ENST00000562166 1838 ntBASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LTBP4Q8N2S1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.54■■□□□ 1.52
LTBP4Q8N2S1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 AC098614.1-201ENST00000368528 745 ntBASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 AC092552.1-201ENST00000547243 906 ntBASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 EP400NL-214ENST00000641289 2402 ntBASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 AL512384.1-201ENST00000406683 331 ntBASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 KRT17P8-201ENST00000540749 863 ntBASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 AC073592.8-201ENST00000624126 511 ntBASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
LTBP4Q8N2S1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LTBP4Q8N2S1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms