Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 AC092474.2-201ENST00000424288 719 ntBASIC26.25■■□□□ 1.79
ABCA6Q8N139 AC069262.1-201ENST00000539058 672 ntBASIC26.25■■□□□ 1.79
ABCA6Q8N139 DAD1-205ENST00000543337 501 ntTSL 3 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 GGTLC5P-201ENST00000617623 998 ntBASIC26.25■■□□□ 1.79
ABCA6Q8N139 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 AC093214.1-201ENST00000511688 1107 ntBASIC26.25■■□□□ 1.79
ABCA6Q8N139 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC26.25■■□□□ 1.79
ABCA6Q8N139 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
ABCA6Q8N139 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA6Q8N139 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA6Q8N139 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA6Q8N139 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA6Q8N139 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 YTHDF3-AS1-201ENST00000603538 718 ntBASIC26.24■■□□□ 1.79
ABCA6Q8N139 AC007064.4-201ENST00000637740 555 ntBASIC26.24■■□□□ 1.79
ABCA6Q8N139 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC26.24■■□□□ 1.79
ABCA6Q8N139 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ABCA6Q8N139 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 GSAP-205ENST00000430584 600 ntTSL 5 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 AC012645.4-201ENST00000610691 1061 ntBASIC26.23■■□□□ 1.79
ABCA6Q8N139 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
ABCA6Q8N139 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ABCA6Q8N139 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 PHGDH-209ENST00000641074 1780 ntBASIC26.22■■□□□ 1.79
ABCA6Q8N139 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 NEK7-201ENST00000367383 586 ntTSL 2 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 BAD-202ENST00000394531 631 ntTSL 3 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 AC087641.1-201ENST00000557561 1021 ntBASIC26.22■■□□□ 1.79
ABCA6Q8N139 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 AC109462.3-201ENST00000573934 613 ntBASIC26.22■■□□□ 1.79
ABCA6Q8N139 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC26.22■■□□□ 1.79
ABCA6Q8N139 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ABCA6Q8N139 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
ABCA6Q8N139 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA6Q8N139 DDT-204ENST00000404092 805 ntTSL 3 BASIC26.21■■□□□ 1.79
ABCA6Q8N139 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC26.21■■□□□ 1.79
ABCA6Q8N139 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA6Q8N139 CXCL1P1-201ENST00000502804 216 ntBASIC26.21■■□□□ 1.79
ABCA6Q8N139 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA6Q8N139 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ABCA6Q8N139 AF228730.6-201ENST00000641497 218 ntBASIC26.21■■□□□ 1.79
ABCA6Q8N139 AC084121.3-201ENST00000641716 218 ntBASIC26.21■■□□□ 1.79
ABCA6Q8N139 AC105233.6-201ENST00000642093 218 ntBASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms