Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 RNF126P1-202ENST00000569893 925 ntBASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 GPR32P1-201ENST00000601788 811 ntBASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 AC006116.8-202ENST00000587620 1550 ntBASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC116Q8IYX3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC116Q8IYX3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 Z83836.1-201ENST00000624605 1642 ntBASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 NTF6B-201ENST00000591913 560 ntBASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 AC009154.2-201ENST00000621177 724 ntBASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC116Q8IYX3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC116Q8IYX3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms