Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC004449.1-201ENST00000564240 433 ntBASIC21.6■■□□□ 1.05
SLX4Q8IY92 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 AC138761.1-201ENST00000584393 385 ntBASIC21.6■■□□□ 1.05
SLX4Q8IY92 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 GGTLC5P-201ENST00000617623 998 ntBASIC21.6■■□□□ 1.05
SLX4Q8IY92 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLX4Q8IY92 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLX4Q8IY92 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLX4Q8IY92 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLX4Q8IY92 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLX4Q8IY92 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.6■■□□□ 1.05
SLX4Q8IY92 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 AC023141.13-201ENST00000604991 943 ntBASIC21.59■■□□□ 1.05
SLX4Q8IY92 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 AJ011932.1-201ENST00000621707 465 ntBASIC21.59■■□□□ 1.05
SLX4Q8IY92 AC105339.1-204ENST00000636249 355 ntBASIC21.59■■□□□ 1.05
SLX4Q8IY92 AC007064.4-201ENST00000637740 555 ntBASIC21.59■■□□□ 1.05
SLX4Q8IY92 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLX4Q8IY92 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLX4Q8IY92 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLX4Q8IY92 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLX4Q8IY92 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLX4Q8IY92 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.59■■□□□ 1.05
SLX4Q8IY92 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.58■■□□□ 1.05
SLX4Q8IY92 AC092919.2-201ENST00000623631 1645 ntBASIC21.58■■□□□ 1.05
SLX4Q8IY92 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLX4Q8IY92 PTCHD3P3-201ENST00000403073 906 ntBASIC21.58■■□□□ 1.05
SLX4Q8IY92 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLX4Q8IY92 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC21.58■■□□□ 1.05
SLX4Q8IY92 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SLX4Q8IY92 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.58■■□□□ 1.05
SLX4Q8IY92 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.58■■□□□ 1.05
SLX4Q8IY92 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLX4Q8IY92 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
SLX4Q8IY92 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SLX4Q8IY92 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLX4Q8IY92 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.58■■□□□ 1.04
SLX4Q8IY92 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLX4Q8IY92 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLX4Q8IY92 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLX4Q8IY92 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.58■■□□□ 1.04
SLX4Q8IY92 AC074386.1-202ENST00000463561 864 ntBASIC21.57■■□□□ 1.04
SLX4Q8IY92 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.57■■□□□ 1.04
SLX4Q8IY92 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 AL353135.1-201ENST00000606729 504 ntBASIC21.57■■□□□ 1.04
SLX4Q8IY92 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 AC006116.8-202ENST00000587620 1550 ntBASIC21.57■■□□□ 1.04
SLX4Q8IY92 AC009336.1-201ENST00000608941 1553 ntBASIC21.57■■□□□ 1.04
SLX4Q8IY92 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 PAWRP1-201ENST00000451083 565 ntBASIC21.57■■□□□ 1.04
SLX4Q8IY92 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.57■■□□□ 1.04
SLX4Q8IY92 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SLX4Q8IY92 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLX4Q8IY92 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 AC100803.2-201ENST00000562459 1963 ntBASIC21.56■■□□□ 1.04
SLX4Q8IY92 AC097637.2-201ENST00000624096 1997 ntBASIC21.56■■□□□ 1.04
SLX4Q8IY92 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLX4Q8IY92 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLX4Q8IY92 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 AC009093.7-201ENST00000623853 1223 ntBASIC21.56■■□□□ 1.04
SLX4Q8IY92 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.56■■□□□ 1.04
SLX4Q8IY92 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms