Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC60Q8IWA6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 COX5BP2-201ENST00000392354 334 ntBASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 AC079776.4-201ENST00000511039 504 ntBASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 AL773604.1-201ENST00000617417 272 ntBASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC60Q8IWA6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 AF186996.4-201ENST00000467186 377 ntBASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 RNPS1P1-201ENST00000507437 918 ntBASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 AD001527.2-201ENST00000622994 785 ntBASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC60Q8IWA6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 SIRPAP1-201ENST00000448467 1770 ntBASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 PMPCAP1-201ENST00000508114 1576 ntBASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 AL031284.1-201ENST00000419297 478 ntBASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 HNRNPDP1-201ENST00000439535 754 ntBASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 AC021087.4-201ENST00000563761 564 ntBASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 AC064862.7-201ENST00000604520 867 ntBASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 FLJ13224-201ENST00000313737 1514 ntBASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC60Q8IWA6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC60Q8IWA6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms