Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 AL356309.3-201ENST00000624132 1934 ntBASIC19.89■□□□□ 0.77
TRIM50Q86XT4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM50Q86XT4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 AC139887.3-201ENST00000568585 713 ntBASIC19.88■□□□□ 0.77
TRIM50Q86XT4 AC025062.2-201ENST00000605477 670 ntBASIC19.88■□□□□ 0.77
TRIM50Q86XT4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 AC004408.2-201ENST00000623613 2777 ntBASIC19.88■□□□□ 0.77
TRIM50Q86XT4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.88■□□□□ 0.77
TRIM50Q86XT4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 BCL2-203ENST00000589955 5011 ntBASIC19.87■□□□□ 0.77
TRIM50Q86XT4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 AC020763.4-201ENST00000623414 4170 ntBASIC19.87■□□□□ 0.77
TRIM50Q86XT4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 MIR574-201ENST00000385209 96 ntBASIC19.87■□□□□ 0.77
TRIM50Q86XT4 AC096633.1-201ENST00000422446 749 ntBASIC19.87■□□□□ 0.77
TRIM50Q86XT4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 AC093909.1-201ENST00000504731 1122 ntBASIC19.87■□□□□ 0.77
TRIM50Q86XT4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 AC116407.3-201ENST00000623905 1129 ntBASIC19.87■□□□□ 0.77
TRIM50Q86XT4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 AP000867.4-201ENST00000641616 219 ntBASIC19.87■□□□□ 0.77
TRIM50Q86XT4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM50Q86XT4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 AC100803.2-201ENST00000562459 1963 ntBASIC19.86■□□□□ 0.77
TRIM50Q86XT4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM50Q86XT4 AC097374.2-201ENST00000618617 1306 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms