Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRRTM1Q86UE6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 AL135905.2-201ENST00000584934 1404 ntBASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 AC022898.2-201ENST00000616822 1312 ntBASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 REXO1L11P-201ENST00000620964 1927 ntBASIC15.53■□□□□ 0.08
LRRTM1Q86UE6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 ID1-201ENST00000376105 1233 ntBASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 AL353719.1-201ENST00000566847 864 ntBASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 AC010240.3-201ENST00000607688 395 ntBASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 AL359736.2-201ENST00000621992 437 ntBASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 LINC01451-201ENST00000623792 534 ntBASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRTM1Q86UE6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRTM1Q86UE6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM1Q86UE6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRTM1Q86UE6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRTM1Q86UE6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.52■□□□□ 0.07
LRRTM1Q86UE6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 LINC00167-201ENST00000530583 1419 ntBASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRTM1Q86UE6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms