Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 AC008735.5-201ENST00000623544 497 ntBASIC22.49■■□□□ 1.19
COPS6Q7L5N1 AC073592.5-201ENST00000624854 528 ntBASIC22.49■■□□□ 1.19
COPS6Q7L5N1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 AC009949.1-201ENST00000623048 1830 ntBASIC22.49■■□□□ 1.19
COPS6Q7L5N1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COPS6Q7L5N1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 SPDYE21P-201ENST00000413323 827 ntBASIC22.48■■□□□ 1.19
COPS6Q7L5N1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 AL022326.1-202ENST00000641533 845 ntBASIC22.48■■□□□ 1.19
COPS6Q7L5N1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 AL020996.1-203ENST00000536896 2307 ntBASIC22.48■■□□□ 1.19
COPS6Q7L5N1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COPS6Q7L5N1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 AL353593.2-201ENST00000602529 1483 ntBASIC22.47■■□□□ 1.19
COPS6Q7L5N1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 AC098831.1-202ENST00000438821 336 ntBASIC22.47■■□□□ 1.19
COPS6Q7L5N1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 POLD2P1-201ENST00000511220 997 ntBASIC22.47■■□□□ 1.19
COPS6Q7L5N1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 AC132938.5-201ENST00000624980 1813 ntBASIC22.47■■□□□ 1.19
COPS6Q7L5N1 SIGLEC16-201ENST00000599858 1437 ntBASIC22.47■■□□□ 1.19
COPS6Q7L5N1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 AP002414.3-201ENST00000589352 1468 ntBASIC22.47■■□□□ 1.19
COPS6Q7L5N1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COPS6Q7L5N1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 PRYP5-201ENST00000451909 266 ntBASIC22.46■■□□□ 1.19
COPS6Q7L5N1 KRT18P58-201ENST00000527480 1120 ntBASIC22.46■■□□□ 1.19
COPS6Q7L5N1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COPS6Q7L5N1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.45■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms