Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AC007967.3-201ENST00000434308 558 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 HNRNPDP1-201ENST00000439535 754 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 SART3-203ENST00000546611 1184 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 GPALPP1-207ENST00000611650 899 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AC006538.3-201ENST00000612495 578 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ESPNP-201ENST00000270691 2015 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AC073592.3-201ENST00000625118 1834 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 AC093010.1-201ENST00000473625 1624 ntBASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.41□□□□□ -0.1
C9orf139Q6ZV77 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 SLC25A1P1-201ENST00000528351 927 ntBASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 AC022898.2-201ENST00000616822 1312 ntBASIC14.4□□□□□ -0.1
C9orf139Q6ZV77 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 ZNF259P1-201ENST00000407656 1365 ntBASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
C9orf139Q6ZV77 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms